- Quick specs
- Price: Free
- Operating system: Windows 95/98/Me/2000/XP/NT
- Date added: October 25, 2005
- Total Downloads: 2,372
- Downloads last week: 55
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Publisher's description
From Mount Sinai School of Medicine Iyengar Lab :The discovery process of cellular signal transduction pathways has reached a stage where pathways are combined to form large networks of interactions. Viewing protein-protein and ligand-protein interactions as graphs (networks) where bio-molecules are represented as vertices (nodes) and interactions are represented as edges (links) is becoming increasingly popular. The emergence of datasets of large-scale networks made of cellular components and interactions provides the opportunity for statistical topological analysis and the challenge of network visualization. SAVI is a desktop application that implements standard methods to compute the clustering, diameter, connectivity distribution and detecting and visualizing network motifs.
Additionally, SAVI generates a complete Web site from network datasets in text format. SAVI contains a tool called pathway-generator. This tool creates signaling connection maps as Web pages from large datasets of interactions.
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