Icon of program: Transform

Transform for Mac

By Markus WinterFreeUser Rating

Key Details of Transform

  • Common text & DNA/protein sequence transformations.
  • Last updated on July 29, 2009
  • There have been 5 updates
  • Virus scan status:

    Clean (it's extremely likely that this software program is clean)


Developer's Description

Common text & DNA/protein sequence transformations.

I find Excel to be brilliant for making pretty sequences and sequence alignments - however each character needs to be in a separate cell.So I wrote a little utility to do often used text / sequence transformations:

  • Insert Tab before / after each character
  • Insert Return after each character
  • Keep only letters a-Z
  • Format in blocks of 3, 10, 50, 100
  • Remove leading / trailing / multiple spaces
  • Reverse / complement/ invert DNA sequence
  • Translate DNA sequence in frame 1 / 2 / 3
  • Backtranslate protein into human / E. coli DNA (using the most frequently used codon)
  • Convert 3-Letter AminoAcid code into 1-Letter code
  • Convert 1-Letter AminoAcid code into 3-Letter code (spaced / tabbed)
  • Get protein sequence info

... and much more (just ignore the bits you don't need)

If there are other transformations you'd like just drop me a line via the contact form on my website

Please note that this program will run as it is - there is no installation, no files will be put anywhere (registry, system, etc in the Windows version) so it should even run if you are on "managed computers" like we are in our lab.

If you find it useful then a donation is appreciated


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Full Specifications

GENERAL
Release
March 21, 2009
Latest update
July 29, 2009
Version
0.11
OPERATING SYSTEMS
Platform
Mac
Operating System
Mac OS X, Mac OS X 10.5, Mac OS X 10.3.9, Mac OS X 10.4
Additional Requirements
None
POPULARITY
Total Downloads
191
Downloads Last Week
0

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User Reviews

5/5

1 User Votes