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GATE for Windows

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Developer’s Description

By Mount Sinai School of Medicine Ma'ayan
Analyse and visualize high-dimensional time-series expression data.
GATE (Grid Analysis of Time-Series Expression) is an integrated computational software platform for the analysis and visualization of high-dimensional bio-molecular time-series. GATE uses a correlation-based clustering algorithm to arrange molecular time-series on a two-dimensional hexagonal array and dynamically colors individual hexagons according to the expression level of the molecular component to which they are assigned, to create animated movies of systems-level molecular regulatory dynamics. In order to infer potential regulatory control mechanisms from patterns of correlation, GATE also allows interactive interrogation of movies against a wide variety of prior knowledge datasets. GATE movies can be paused and are interactive, allowing users to reconstruct networks and perform functional enrichment analyses. Movies created with GATE can be saved in Flash format and inserted directly into PDF manuscript files as interactive figures.
Icon of program: GATE

GATE for Windows

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Used GATE for Windows? Share your experience and help other users.

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Full Specifications

GENERAL
Release
Latest update
Version
2014
OPERATING SYSTEMS
Platform
Windows
Operating System
  • Windows NT
  • Windows XP
  • Windows 7
  • Windows Vista
  • Windows 10
  • Windows Server
  • Windows 2003
Additional Requirements
None
POPULARITY
Total Downloads
476
Downloads Last Week
0
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