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KaKs Calculator

By Da Peng Wang Free

Developer's Description

KaKs Calculator is a software package that calculates nonsynonymous and synonymous substitution rates through model selection and model averaging. Since existing methods for this estimation adopt their specific mutation models that consider different evolutionary features, leading to diverse estimates, KaKs Calculator implements a set of candidate models in a maximum likelihood framework and adopts the Akaike information criterion to measure fitness between models and data, aiming to include as many features as needed for accurately capturing evolutionary information in protein coding sequences. In addition, several existing methods for calculating Ka and Ks are also incorporated into this software.

Full Specifications

What's new in version 2.0

General

Release September 28, 2010
Date Added June 27, 2010
Version 2.0

Operating Systems

Operating Systems Windows 2000, Windows Vista, Windows 98, Windows Me, Windows, Windows NT, Windows 7, Windows XP
Additional Requirements None

Popularity

Total Downloads 616
Downloads Last Week 0
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